Supplementary Information

This dissertation contains a lot of supplementary materials. Therefore, none of it is included in the dissertation itself. I will instead provide links to the online material, which will be useful unless you are reading a physical copy. If you are reading the physical book, well done—it means I like you enough, or felt obligated enough, to provide you with a rare, albeit valueless, copy. Or mabe you have borrowed a copy of this VERY niche PhD dissertation from the library. In both cases you have to options: you could tediously type out the entire url, or you could just go read the online version.

Most of the materials can be found on the Open Science Framework (DOI: 10.17605/OSF.IO/3YX8M).

The oral biofilm model protocols are published on protocols.io (DOI: 10.17504/protocols.io.dm6gpj9rdgzp/v1).

Article 1:

• DOI: 10.1101/2023.05.23.541904
• Supplementary material: 10.1101/2023.05.23.541904
• Code: 10.4121/99932661-fe79-4f4e-a812-a8917ad18fd0
• Data: PRJEB61886 (ENA accession number) & 10.4121/466b2588-9689-4d84-a8a0-5216aa39e40b

Article 2:

• DOI: 10.3389/feart.2022.886512
• Supplementary material: https://www.frontiersin.org/articles/file/downloadfile/886512_supplementary-materials_datasheets_1_pdf/octet-stream/Data%20Sheet%201.PDF/1/886512?isPublishedV2=False
• Code and data: 10.5281/zenodo.5604669

Article 3:

• DOI: 10.24072/pcjournal.414
• Supplementary material: 10.5281/zenodo.10069669
• Code: 10.5281/zenodo.11040640
• Data: 10.5281/zenodo.7648756
• PCI_Archaeology recommendation: 10.24072/pci.archaeo.100389